Color coding nodes and edges

Hi everyone,

is there a way in BiologicalNetworks to give colors
to different types of nodes (genes, proteins) and edges (interactions)? This should be based on several attributes.

For example in my network I need:

- red proteins
- blue genes
- green protein-protein interactions
- black protein-DNA interactions

Thank you!

Hi John,

in the Nodes/Edges properties panel (usually on the right side) there is a "Visual Properties" panel where you can tune visual properties on the sets of genes and edges.

This used in combination with Right Click Mouse on the Network and then:
Selection->
- Select all Nodes
- Select By Type-> Gene, Protein, mRNA, Metabolite, Transcription Factor, Reaction
- Select all Edges
- Select By Property Range-> Binding, Co-expression, Co-citation

enables you to color code any combination and types of nodes and edges.

Please let us know if you have problems with using these features.

Thanks.

Hello!